rs147554036 chr12:49234563 G>A
- Sequence
tcgggctcccacccgcgtggcgcc[G/A]cagtcctggcgagccccgagcgct
- ASB in cell types
- CD14+ monocytes thymus-derived CD34- cells breast tumor
- ASB for transcription factors
- STAT1_HUMAN BC11B_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 1.66 | -0.27 | 2.00 | n/a | No Hit | |||
| BC11B_HUMAN | 2.51 | -4.74 | 2.00 | n/a | n/a | |||
| ESR1_HUMAN | 2.28 | -1.54 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Thyroid, Whole_Blood