rs147886588 chr6:118894738 C>G
- Sequence
ctgccgggctcaacttgcgaggaa[C/G]ttgtttgagcggaggagcggaggt
- ASB in cell types
- 22RV1 (prostate carcinoma) breast tumor
- ASB for transcription factors
- TYY1_HUMAN ESR1_HUMAN RBBP5_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | 1.06 | 2.09 | 1.78 | n/a | No Hit | |||
| ESR1_HUMAN | 2.60 | -0.45 | 1.67 | n/a | No Hit | |||
| RBBP5_HUMAN | 1.91 | -3.78 | 1.50 | n/a | n/a | |||
| ANDR_HUMAN | 2.00 | -0.75 | 2.00 | n/a | No Hit |
Items per page:
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Cells_Cultured_fibroblasts, Heart_Left_Ventricle, Nerve_Tibial, Pituitary, Spleen, Thyroid, Whole_Blood