rs147908340 chr1:108049679 C>A
- Sequence
gcttgtacttgcagcgtgtgggtg[C/A]cagcagcaggcagaccaacaaagc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.28 | 1.05 | 2.02 | -2.73 | Discordant |
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Motif analysis
