rs147967125 chr20:62874296 C>T

Sequence
cctgtccagtggacacgtgaccca[C/T]gtgaccttacctatcactggagat
ASB in cell types
HepG2 (hepatoblastoma) K562 (myelogenous leukemia)
ASB for transcription factors
ZNF48_HUMAN RAD51_HUMAN ZN318_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZNF48_HUMAN 3.11 -2.80 3.7·10-61.00 1.00 n/a n/a
RAD51_HUMAN 0.85 -0.98 2.9·10-51.00 1.50 n/a n/a
ZN318_HUMAN 2.49 -4.79 0.021.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Muscle_Skeletal Nerve_Tibial Thyroid

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