rs148014457 chr14:61695469 G>A

Sequence
tctcccctccccgcgcgcccgagc[G/A]cgcctccgcccttgcccgccccct
ASB in cell types
adult erythroblasts monocytes from periferal blood 22RV1 (prostate carcinoma)
ASB for transcription factors
RBBP5_HUMAN SRBP2_HUMAN ANDR_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RBBP5_HUMAN 2.85 n/a 7.0·10-31.00 3.00 n/a n/a
SRBP2_HUMAN 2.84 1.18 0.010.61 3.00 2.77 Discordant
ANDR_HUMAN 2.85 n/a 0.011.00 3.00 n/a No Hit
CTCF_HUMAN -1.81 2.20 1.000.04 1.00 n/a No Hit
Items per page:
1 – 4 of 4

Motif analysis

SRBP2_HUMAN Discordant
SRBP2_HUMAN pic

Genetic associations

No data available

Download