rs148015593 chr12:122085762 T>G
- Sequence
ttggcgtggagtgggacaacaaga[T/G]aagtgcttttgctggatggtgttc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- NFIC_HUMAN HTF4_HUMAN KDM1A_HUMAN TIF1A_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFIC_HUMAN | 3.39 | n/a | 2.00 | n/a | No Hit | |||
| HTF4_HUMAN | 3.32 | n/a | 2.00 | n/a | No Hit | |||
| KDM1A_HUMAN | 2.90 | -5.13 | 2.00 | n/a | n/a | |||
| TIF1A_HUMAN | 2.84 | n/a | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Muscle_Skeletal, Pancreas, Small_Intestine_Terminal_Ileum