rs148082329 chr6:105403185 G>A
- Sequence
gggcggcaccgagcgtgcgctaag[G/A]ccggcgcacagctccctctgcagg
- ASB in cell types
- K562 (myelogenous leukemia) thymus-derived CD34- cells MCF7 (Invasive ductal breast carcinoma) foreskin keratinocyte
- ASB for transcription factors
- BC11B_HUMAN NELFE_HUMAN NRF1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BC11B_HUMAN | 2.93 | -0.20 | 2.00 | n/a | n/a | |||
| NELFE_HUMAN | -1.86 | 2.24 | 2.00 | n/a | n/a | |||
| NRF1_HUMAN | -0.01 | 1.67 | 2.00 | -0.22 | Weak Discordant |
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Motif analysis
