rs148577969 chr1:26677769 G>A
- Sequence
gcaggtgtcttggagaggaagctt[G/A]gccaagggccagctgcacttgagc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- SOX6_HUMAN ILF3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SOX6_HUMAN | 2.90 | -2.56 | 1.00 | n/a | No Hit | |||
| ILF3_HUMAN | -1.04 | 1.65 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Brain_Cortex, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Spleen, Thyroid