rs148684525 chr10:43138492 C>G
- Sequence
gggggtgggtggctgaggcggcgg[C/G]gggcccaaggcgtgaggcgccgcc
- ASB in cell types
- HeLa (cervical adenocarcinoma) MDA-MB-231 (breast adenocarcinoma) breast tumor
- ASB for transcription factors
- INT11_HUMAN ESR1_HUMAN BRD2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| INT11_HUMAN | 2.09 | -0.07 | 2.00 | n/a | n/a | |||
| ESR1_HUMAN | 2.51 | -4.74 | 2.00 | n/a | No Hit | |||
| BRD2_HUMAN | 1.16 | 0.16 | 3.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg