rs148868540 chr19:18419362 G>A
- Sequence
cccgcgggcggcgtagaggcagcg[G/A]gcgggggcgcgcgcggcgggagga
- ASB in cell types
- MDA-MB-231-1833 (breast cancer cells, bone-tropic metastatic line) MDA-MB-231 (breast adenocarcinoma) MDA-MB-231p27CK-DD (breast cancer cells, phosphimimetic p27 cell line) HUVEC-C (HUVEC, umbilical vein endothelial cells)
- ASB for transcription factors
- JUN_HUMAN CDN1B_HUMAN TF65_HUMAN BRD2_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | -1.16 | 2.13 | 2.25 | n/a | No Hit | |||
| CDN1B_HUMAN | -1.55 | 2.19 | 2.33 | n/a | n/a | |||
| TF65_HUMAN | 1.85 | -0.99 | 2.00 | n/a | No Hit | |||
| BRD2_HUMAN | 0.06 | 1.50 | 2.00 | n/a | n/a |
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