rs148871409 chr1:20633892 A>T

Sequence
ggctgggcctcatcgaggaaaaac[A/T]ggcggagagccggcgggcggtctc
ASB in cell types
K562 (myelogenous leukemia)

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia) 0.72 0.58 3.2·10-40.98 1.06
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Motif analysis

No data available

Genetic associations

GRASP parkinsons disease
GTEx eQTL Adipose_Subcutaneous,  Adrenal_Gland,  Brain_Cerebellar_Hemisphere,  Cells_Cultured_fibroblasts,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Muscle_Skeletal,  Pancreas,  Thyroid,  Whole_Blood

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