rs149032780 chr11:60906217 G>A
- Sequence
aatgcaccccgctccgacgggggg[G/A]gctccggtgctgacaggccgccgc
- ASB in cell types
- MS-1 (Small cell lung carcinoma)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -3.24 | 3.55 | 1.00 | 1.11 | Weak Concordant | |||
| STAG1_HUMAN | -2.06 | 2.33 | 1.00 | n/a | n/a |
Items per page:
1 – 2 of 2
Motif analysis
