rs149039920 chr15:90035310 G>A
- Sequence
gacttgctgtggcttcctggcctg[G/A]ctcagcattggccgtccggctcct
- ASB in cell types
- macrophages CD14+ monocytes neutrophils from periferal blood
- ASB for transcription factors
- STAT1_HUMAN CEBPB_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.50 | -0.12 | 2.00 | n/a | No Hit | |||
| CEBPB_HUMAN | 1.92 | -5.59 | 2.50 | n/a | No Hit | |||
| SMC3_HUMAN | -3.69 | 2.03 | 1.50 | n/a | n/a |
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