rs149054433 chr19:934998 G>A
- Sequence
tggccagacacctgtgttcccagt[G/A]tcaacagtggcctgggcccaacca
- ASB in cell types
- breast tumor
- ASB for transcription factors
- FOXA1_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 2.55 | 0.01 | 2.00 | -1.86 | Weak Concordant | |||
| ESR1_HUMAN | 2.28 | -1.54 | 2.00 | n/a | No Hit |
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Motif analysis
