rs149136377 chr6:60910511 C>T
- Sequence
tgcctctggaccctgtgatgattg[C/T]gttaactgcacaaattgttcgtaa
- ASB in cell types
- WA01 (H1, human embryonic stem cells)
- ASB for transcription factors
- DUX4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| DUX4_HUMAN | 2.33 | -2.00 | 1.00 | -3.39 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Brain_Anterior_cingulate_cortex_BA24, Brain_Cortex, Brain_Frontal_Cortex_BA9, Lung, Spleen