rs149161869 chr19:33778164 A>T

Sequence
tcgcgttcgtacccacaggcgcag[A/T]gccgttctccgccgccaggtgggg
ASB in cell types
CD34+ hematopoietic stem cells tibial nerve
ASB for transcription factors
CTCF_HUMAN TIF1B_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.49 0.63 1.001.1·10-6 1.06 n/a No Hit
TIF1B_HUMAN 2.98 -5.49 3.0·10-31.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Putamen_basal_ganglia

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