rs149311448 chr18:31493245 T>C

Sequence
atcatttgtttattatatctgcat[T/C]gccatttacgtgggataaaggttg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF1_HUMAN NFAC3_HUMAN RAD51_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN 1.51 -1.64 5.5·10-41.00 1.25 n/a n/a
NFAC3_HUMAN 2.68 -2.33 1.7·10-31.00 1.00 n/a No Hit
RAD51_HUMAN 2.76 -2.50 3.7·10-31.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

No data available

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