rs149311800 chr4:3950057 C>T
- Sequence
ggctgtcagcaggctgcttctcca[C/T]ggctggccccgtcctaagattcac
- ASB in cell types
- HCT-116 (colon carcinoma) bipolar neuron IPSC-derived bipolar neuron GM23338
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.89 | -0.43 | 1.43 | n/a | No Hit | |||
| RAD21_HUMAN | 2.30 | -1.69 | 1.17 | n/a | n/a |
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