rs149374821 chr12:6943867 C>T
- Sequence
ctagtaggctttctggctttttac[C/T]ggaaagcccctcttatgatgtttg
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) HUVEC-C (HUVEC, umbilical vein endothelial cells)
- ASB for transcription factors
- FLI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FLI1_HUMAN | 1.71 | -0.69 | 1.00 | -4.51 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Breast_Mammary_Tissue, Esophagus_Mucosa, Heart_Left_Ventricle, Lung, Pancreas, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid