rs149490058 chr19:54354023 A>G
- Sequence
ctgggattacaggcgtgagcctcc[A/G]tgcccggcctgtttttgtttttta
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) IPSC-derived bipolar neuron epithelial cell of prostate GM12891 (male B- cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.43 | 0.06 | 1.48 | n/a | No Hit |
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