rs151885 chr5:127834144 A>G
- Sequence
acagaagttaatcaccagagatgt[A/G]cctagacccttatcagcccagaga
- ASB in cell types
- MS-1 (Small cell lung carcinoma) GM18526 (B – cells Lymphoblastoid Cell Lines) GM19099 (female B-cells Lymphoblastoid Cell Lines) GM12890 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.13 | 1.81 | 1.47 | n/a | No Hit | |||
| STAG1_HUMAN | -1.11 | 2.22 | 1.00 | n/a | n/a |
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