rs1531829 chr1:21626811 G>A
- Sequence
cattgaggggctaccagggctacc[G/A]ctattacgaatgacagtgaccgtg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- CLOCK_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CLOCK_HUMAN | -1.14 | 1.99 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP birth weight, crohns disease, fasting blood glucose, height, irritible bowel syndrome, tardive dyskinesia