rs153520 chr5:143576959 T>A
- Sequence
ctctgtgtggtacaggtatgaaaa[T/A]atccctctgcatgcctttcttgga
- ASB in cell types
- Detroit 562 (Pharyngeal squamous cell carcinoma)
- ASB for transcription factors
- TF65_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | -0.35 | 1.15 | 2.22 | 2.93 | Concordant |
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Motif analysis
