rs155247 chr16:2268334 A>G
- Sequence
gcgggcacatgggtagcctgttga[A/G]cctgggagggcagcgcgatgaccg
- ASB in cell types
- HepG2 (hepatoblastoma) adult erythroblasts primary human epidermal keratinocytes
- ASB for transcription factors
- TYY1_HUMAN RBBP5_HUMAN BRD4_HUMAN RBM25_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | n/a | 3.13 | 2.00 | n/a | No Hit | |||
| RBBP5_HUMAN | 3.16 | n/a | 2.00 | n/a | n/a | |||
| BRD4_HUMAN | 0.94 | 1.82 | 1.42 | n/a | n/a | |||
| RBM25_HUMAN | 0.46 | 2.21 | 2.00 | n/a | n/a | |||
| FOXA2_HUMAN | n/a | 2.69 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Brain_Amygdala, Brain_Anterior_cingulate_cortex_BA24, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Stomach, Thyroid, Whole_Blood