rs156902 chr1:16514291 G>C
- Sequence
tcccctgccaggtaagtatgaaac[G/C]ttgtgcctctgccccgacacagcc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) HUVEC-C (HUVEC, umbilical vein endothelial cells) CD14+ monocytes IMR90 (lung fibroblasts)
- ASB for transcription factors
- TF65_HUMAN STAT1_HUMAN ESR1_HUMAN PO2F2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | 0.10 | 2.66 | 2.00 | n/a | No Hit | |||
| STAT1_HUMAN | -4.74 | 2.29 | 1.83 | n/a | No Hit | |||
| ESR1_HUMAN | -4.79 | 2.70 | 2.00 | n/a | No Hit | |||
| PO2F2_HUMAN | 1.93 | -0.87 | 1.83 | n/a | No Hit | |||
| ZBED1_HUMAN | 1.63 | -2.90 | 1.50 | n/a | No Hit |
Items per page:
1 – 5 of 5