ADASTRA v6.1.0
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rs157357
chr19:58182503
T
>
C
Sequence
ctgatcatctctccagaactaggg[T/C]agacgtttggcctcattcccatca
ASB in cell types
HEK293 (embryonic kidney)
22RV1 (prostate carcinoma)
ASB for transcription factors
PRD10_HUMAN
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PRD10_HUMAN
2.31
n/a
3.6·10
-3
1.00
2.00
n/a
n/a
ANDR_HUMAN
2.46
-1.50
0.05
1.00
2.00
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
birth weight
,
infant head circumference
,
ldl cholesterol
,
prop taste detection threshold
GTEx eQTL
Colon_Transverse
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Testis
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)