rs158214 chr5:56415464 C>T
- Sequence
ggaactacagccatcaccccattt[C/T]ccatgacaaacagcagggctctga
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) MDM(monocyte derived macrophages) monocyte-derived macrophages from peripheral blood macrophages form periferal blood
- ASB for transcription factors
- SPI1_HUMAN MEF2B_HUMAN SKIL_HUMAN PKNX1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.25 | 2.13 | 1.49 | n/a | No Hit | |||
| MEF2B_HUMAN | 2.63 | -1.81 | 2.00 | n/a | No Hit | |||
| SKIL_HUMAN | 3.21 | -3.35 | 1.00 | n/a | n/a | |||
| PKNX1_HUMAN | 2.31 | 2.07 | 1.50 | n/a | No Hit | |||
| TRI22_HUMAN | 1.92 | -1.54 | 1.00 | n/a | n/a |
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