rs158791 chr5:36948260 C>G

Sequence
ataagataaatattaattggatgc[C/G]tcatgaaggactaaatattttaga
ASB in cell types
LNCaP (prostate carcinoma)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
LNCaP (prostate carcinoma) 1.25 -0.63 3.3·10-31.00 1.47
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Motif analysis

No data available

Genetic associations

GRASP bipolar disorder,  body mass index (bmi),  height,  lp-pla2 mass,  waist hip ratio
GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Artery_Coronary,  Artery_Tibial,  Breast_Mammary_Tissue,  Cells_EBV-transformed_lymphocytes,  Esophagus_Gastroesophageal_Junction,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Spleen,  Testis,  Whole_Blood

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