ADASTRA v6.1.0
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rs161360
chr17:3630465
C
>
T
Sequence
ggcagcatccactccctaacttca[C/T]agttgaggcactgctgcaggtgag
ASB in cell types
HT1080 (fibrosarcoma)
ASB for transcription factors
SSRP1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SSRP1_HUMAN
2.54
-2.58
0.04
1.00
1.00
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
ldl cholesterol
,
rheumatoid arthritis
,
triglycerides change with statins
GTEx eQTL
Adrenal_Gland
,
Artery_Aorta
,
Artery_Tibial
,
Heart_Left_Ventricle
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Thyroid
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)