ADASTRA v6.1.0
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rs161742
chr5:98954809
A
>
G
Sequence
tatctaggtctgcaggtggtgaac[A/G]tcctgtctgtccttcattgactgc
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
KDM1A_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KDM1A_HUMAN
2.62
0.35
2.7·10
-3
1.00
2.00
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
body mass index (bmi)
,
infant head circumference
,
ldl cholesterol
,
total cholesterol
GTEx eQTL
Lung
,
Nerve_Tibial
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)