ADASTRA v6.1.0
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rs16238
chr17:39118797
C
>
A
Sequence
gcctacaatctacagcttgtgcag[C/A]ctgagccaatcagatcaccacccg
ASB in cell types
macrophages form periferal blood
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
macrophages form periferal blood
1.59
-0.80
0.04
1.00
2.00
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
hdl cholesterol change with statins
,
infant head circumference
,
ldl cholesterol
,
recurrent early onset major depressive disorder
,
recurrent early onset major depressive disorder (females)
,
schizophrenia
,
total cholesterol
,
years of education
GTEx eQTL
Artery_Tibial
,
Heart_Atrial_Appendage
,
Heart_Left_Ventricle
,
Nerve_Tibial
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale