ADASTRA v6.1.0
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rs164632
chr19:4139852
C
>
T
Sequence
gaggtgggagccatagaagatttc[C/T]ggcagaggagggacaggctctgac
ASB in cell types
K562 (myelogenous leukemia)
MCF7 (Invasive ductal breast carcinoma)
neutrophils from periferal blood
HepG2 (hepatoblastoma)
ASB for transcription factors
STAG1_HUMAN
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View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN
0.14
1.07
1.00
0.05
1.00
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
cystatin c in serum
,
hdl cholesterol
,
microalbuminuria
,
mitral annular calcium
,
primary rhegmatogenous retinal detachment
,
simpson-angus scale
,
total cholesterol
,
triglycerides change with statins
,
variant creutzfeldt-jakob disease
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)