rs164923 chr20:60300278 A>C

Sequence
cctgcaattaaatattacataaaa[A/C]aatgaacatctgagtgcaaataag
ASB in cell types
LNCaP (prostate carcinoma) 22RV1 (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN -0.07 0.75 1.004.2·10-4 1.46 -3.03 Discordant
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Motif analysis

FOXA1_HUMAN Discordant
FOXA1_HUMAN pic

Genetic associations

No data available

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