rs165048 chr2:54790062 T>C
- Sequence
ctgtacaagagggagatctaagaa[T/C]agtcagcattaagtaaatatttgt
- ASB in cell types
- A549 (lung carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| A549 (lung carcinoma) | -1.34 | 1.34 | 1.00 |
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Motif analysis
No data available
Genetic associations
GRASP college completion, cystatin c in serum, hdl cholesterol change with statins, height, microalbuminuria, salmonella-induced pyroptosis, simpson-angus scale, years of education
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Brain_Cerebellum, Brain_Frontal_Cortex_BA9, Esophagus_Mucosa, Lung, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid