rs1676737 chr10:126161487 T>C
- Sequence
ggtcaagcaatattgacggagtgt[T/C]tgctgcaggtgctgtgctaagtgc
- ASB in cell types
- 2588 (Lymphoblastoid Cell Lines) glioblastoma patient-derived cell model foreskin keratinocyte MCF10AT1 (breast premetastatic epithelial cells)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN STAG1_HUMAN PMEPA_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.79 | 0.93 | 1.32 | n/a | No Hit | |||
| RAD21_HUMAN | 1.62 | -0.19 | 1.43 | n/a | n/a | |||
| STAG1_HUMAN | 2.30 | -0.36 | 1.17 | n/a | n/a | |||
| PMEPA_HUMAN | 3.01 | n/a | 2.00 | n/a | n/a |
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