rs16823762 chr2:227628048 A>G
- Sequence
ggggaaccagcagatgccttgagc[A/G]caccgcagagtcaatgcttcctta
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- RUNX3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RUNX3_HUMAN | 2.41 | -2.01 | 1.00 | -1.69 | Weak Concordant |
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Motif analysis
