rs16825684 chr3:175416834 A>G
- Sequence
gcaaaaaaaagtgtgaaaactgca[A/G]ttctatgatacgtgaatgtatgtg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- EP300_HUMAN SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EP300_HUMAN | -1.95 | 2.39 | 1.00 | n/a | n/a | |||
| SPI1_HUMAN | -0.87 | 1.81 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP birth weight, chronic kidney disease, homa-b, ldl cholesterol, microalbuminuria, total cholesterol