rs16828796 chr1:181078644 C>T
- Sequence
gtcccagactaagaaaaagctact[C/T]gggactgtgacctcagaggccccc
- ASB in cell types
- A549 (lung carcinoma) GM12878 (female B-cells lymphoblastoid cell line)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| A549 (lung carcinoma) | 2.20 | -1.03 | 2.00 | |||
| GM12878 (female B-cells lymphoblastoid cell line) | 0.17 | 0.99 | 1.00 |
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