ADASTRA v6.1.0
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rs168293
chr2:8584172
T
>
C
Sequence
gacctttcatcattcctaggcctg[T/C]gtataatctttctctcttttacac
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
K562 (myelogenous leukemia)
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells lymphoblastoid cell line)
0.53
1.23
0.89
1.8·10
-3
1.03
K562 (myelogenous leukemia)
0.77
0.01
0.01
1.00
2.02
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
2 hour glucose
,
chronic kidney disease
,
college completion
,
ldl cholesterol
GTEx eQTL
Colon_Sigmoid
,
Colon_Transverse
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Heart_Atrial_Appendage
,
Kidney_Cortex
,
Liver
,
Minor_Salivary_Gland
,
Pancreas
,
Pituitary
,
Stomach
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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