rs16831518 chr1:160176855 T>C

Sequence
gtatagacagaacatactacagga[T/C]tacaaagcaagcaggctcaccatt
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.62 -4.96 1.4·10-31.00 2.00 3.25 Discordant
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Motif analysis

ANDR_HUMAN Discordant
ANDR_HUMAN pic

Genetic associations

GRASP diabetic retinopathy in type 2 diabetes mellitus,  stabilized warfarin dose,  urinary albumin-to-creatinine ratio
GTEx eQTL Breast_Mammary_Tissue,  Esophagus_Mucosa,  Lung,  Prostate,  Skin_Sun_Exposed_Lower_leg,  Stomach,  Testis

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