rs16832790 chr1:161306153 C>T
- Sequence
gtcctttcctggcttgtgcaattt[C/T]cccttctccatagcactgcaagaa
- ASB in cell types
- neutrophils from periferal blood Kasumi-1 (acute myeloblastic leukemia) monocytes from periferal blood
- ASB for transcription factors
- RAD21_HUMAN MTG8_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 2.14 | -1.43 | 1.50 | n/a | n/a | |||
| MTG8_HUMAN | 2.44 | -0.57 | 1.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP childhood acute lymphoblastic leukemia, coronary artery disease (cad), hdl cholesterol, triglycerides
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Thyroid, Whole_Blood