rs16850660 chr3:166476005 T>G
- Sequence
tgacatattcacagctgggaaaac[T/G]aaacacctgcttttaagggactca
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.21 | 0.10 | 1.68 | n/a | No Hit | |||
| FOXA1_HUMAN | 0.86 | -0.01 | 1.65 | -2.31 | Concordant |
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Motif analysis
