rs16853640 chr1:179088875 G>A

Sequence
ggcccttgttgacccaatttgaag[G/A]cttcacaacagctcgagcctcggt
ASB in cell types
CD14+ monocytes MDM(monocyte derived macrophages)
ASB for transcription factors
STAT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 2.73 n/a 3.9·10-31.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP alzheimers disease bipolar disorder tetrology of fallot
GTEx eQTL Adipose_Visceral_Omentum Adrenal_Gland Breast_Mammary_Tissue Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Muscularis Nerve_Tibial Skin_Sun_Exposed_Lower_leg Testis Thyroid

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