ADASTRA v6.1.0
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rs16853640
chr1:179088875
G
>
A
Sequence
ggcccttgttgacccaatttgaag[G/A]cttcacaacagctcgagcctcggt
ASB in cell types
CD14+ monocytes
MDM(monocyte derived macrophages)
ASB for transcription factors
STAT1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN
2.73
n/a
3.9·10
-3
1.00
2.00
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
alzheimers disease
,
bipolar disorder
,
tetrology of fallot
GTEx eQTL
Adipose_Visceral_Omentum
,
Adrenal_Gland
,
Breast_Mammary_Tissue
,
Colon_Transverse
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Muscularis
,
Nerve_Tibial
,
Skin_Sun_Exposed_Lower_leg
,
Testis
,
Thyroid
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)