rs16858833 chr1:182314436 G>C
- Sequence
cacttcctgaaagaggtctttact[G/C]agtgggtacgcactttaattgttc
- ASB in cell types
- TALL1 (T-Acute Lymphoblastic Leukemia)
- ASB for transcription factors
- SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | -0.86 | 2.79 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP major depressive disorder, major depressive disorder (females), major depressive disorder (males), recurrent early onset major depressive disorder, total cholesterol