rs16859676 chr1:167793914 A>G
- Sequence
gtctctttgcttttgctattctct[A/G]ggtcctagccaaatttgtgggtca
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- TBP_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TBP_HUMAN | -0.29 | 1.84 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, advanced age-related macular degeneration (geographic atrophy), barnes akathisia rating scale, homa-b, simpson-angus scale