rs16864356 chr2:223020551 G>A

Sequence
gaaagagacatgaccaagtcagat[G/A]gtggaagcactgggtacaaagaga
ASB in cell types
GM17942 (lymphoblastoid cell)
ASB for transcription factors
CTCF_HUMAN STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.13 2.30 0.780.02 1.50 n/a No Hit
STAG1_HUMAN -1.10 1.76 1.000.02 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP height mitral annular calcium salmonella-induced pyroptosis
GTEx eQTL Cells_Cultured_fibroblasts

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