rs16876741 chr8:30254802 A>G

Sequence
cctttgcatgtagtggagaagatg[A/G]gtgagccagatgatatgggctaaa
ASB in cell types
TTC-1240 (Rhabdoid tumor of the kidney)
ASB for transcription factors
SMCA4_HUMAN SMRC1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA4_HUMAN 1.54 -0.47 0.021.00 1.00 n/a n/a
SMRC1_HUMAN 1.58 -0.19 0.031.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP birth weight homa-ir
GTEx eQTL Adipose_Visceral_Omentum Artery_Tibial Brain_Cerebellar_Hemisphere Brain_Cerebellum Brain_Cortex Esophagus_Gastroesophageal_Junction Esophagus_Muscularis Lung Pancreas Skin_Sun_Exposed_Lower_leg Whole_Blood

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