rs16883343 chr6:52995577 C>T
- Sequence
cttgacctaagtgtaaagttgaga[C/T]ttccttcaggtttatatagcttgt
- ASB in cell types
- HepG2 (hepatoblastoma) VCaP (prostate carcinoma) GM19099 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- RBM25_HUMAN ELF1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RBM25_HUMAN | -0.35 | 2.29 | 2.00 | n/a | n/a | |||
| ELF1_HUMAN | -0.92 | 2.25 | 1.17 | -2.08 | Discordant |
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Motif analysis
