rs16883398 chr6:20127365 G>A

Sequence
aaatgtcattgctaaccagtcgcc[G/A]gaattatcccctatagcagggatt
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 1.95 -0.87 0.021.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP biploar disorder (bipolar schizoaffective disorder),  irritible bowel syndrome
GTEx eQTL Artery_Aorta,  Artery_Tibial,  Heart_Atrial_Appendage,  Nerve_Tibial,  Pituitary,  Skin_Sun_Exposed_Lower_leg,  Thyroid,  Whole_Blood

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