rs16883399 chr6:20130804 A>G

Sequence
tgtgagcttctcagagattaaacc[A/G]aagctaaaaggatgtcatttcttt
ASB in cell types
D283 Med (medulloblastoma)
ASB for transcription factors
OTX2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
OTX2_HUMAN -0.22 1.54 1.000.04 1.12 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP alzheimers disease alzheimers disease (apoe3 homozygotes) bipolar disorder bipolar disorder (age of onset)
GTEx eQTL Artery_Aorta Artery_Tibial Esophagus_Mucosa Heart_Atrial_Appendage Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Thyroid Whole_Blood

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